STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48324.1COG0642 Signal transduction histidine kinase. (384 aa)    
Predicted Functional Partners:
EAQ50314.1
COG0642 Signal transduction histidine kinase.
 
0.936
EAQ49151.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.876
EAQ48649.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.797
EAQ48323.1
Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.773
EAQ49083.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
0.750
EAQ49132.1
COG2202 FOG: PAS/PAC domain.
 
 
  0.746
EAQ48083.1
Hypothetical protein.
  
   
 0.745
EAQ48322.1
Hypothetical protein.
       0.730
EAQ50603.1
COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
    
 0.721
EAQ49034.1
Hypothetical protein; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
    
 0.721
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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