rimM protein (Leeuwenhoekiella blandensis) - STRING interaction network

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Score

rimM

16S rRNA-processing protein; COG0261 Ribosomal protein L21. (89 aa)

Predicted Functional Partners:

rimM-2

0.642

rpsP

0.633

EAQ49720.1

0.493

EAQ49724.1

0.407

Your Current Organism:

Leeuwenhoekiella blandensis

NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ49720.1	rimM	MED217_01180	MED217_01185	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	0.493
EAQ49720.1	rimM-2	MED217_01180	MED217_01190	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.656
EAQ49720.1	rpsP	MED217_01180	MED217_01195	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.513
EAQ49724.1	rimM	MED217_01200	MED217_01185	Hypothetical protein.	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	0.407
EAQ49724.1	rimM-2	MED217_01200	MED217_01190	Hypothetical protein.	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.518
EAQ49724.1	rpsP	MED217_01200	MED217_01195	Hypothetical protein.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.484
rimM	EAQ49720.1	MED217_01185	MED217_01180	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	0.493
rimM	EAQ49724.1	MED217_01185	MED217_01200	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	Hypothetical protein.	0.407
rimM	rimM-2	MED217_01185	MED217_01190	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.642
rimM	rpsP	MED217_01185	MED217_01195	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.633
rimM-2	EAQ49720.1	MED217_01190	MED217_01180	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	0.656
rimM-2	EAQ49724.1	MED217_01190	MED217_01200	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	Hypothetical protein.	0.518
rimM-2	rimM	MED217_01190	MED217_01185	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	0.642
rimM-2	rpsP	MED217_01190	MED217_01195	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.983
rpsP	EAQ49720.1	MED217_01195	MED217_01180	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	Hypothetical protein; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).	0.513
rpsP	EAQ49724.1	MED217_01195	MED217_01200	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	Hypothetical protein.	0.484
rpsP	rimM	MED217_01195	MED217_01185	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	16S rRNA-processing protein; COG0261 Ribosomal protein L21.	0.633
rpsP	rimM-2	MED217_01195	MED217_01190	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	Putative 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.983