STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49742.1Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain. (915 aa)    
Predicted Functional Partners:
EAQ49739.1
COG5368 Uncharacterized protein conserved in bacteria.
 
     0.835
EAQ49738.1
COG5368 Uncharacterized protein conserved in bacteria.
 
     0.801
EAQ49737.1
Hypothetical protein; COG4099 Predicted peptidase.
 
     0.731
EAQ50415.1
Hypothetical protein.
  
    0.726
EAQ49741.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.708
EAQ49740.1
Putative outer membrane protein probably involved in nutrient binding.
 
     0.702
EAQ49735.1
COG0657 Esterase/lipase.
 
     0.683
EAQ50314.1
COG0642 Signal transduction histidine kinase.
 
   
 0.627
EAQ50414.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.616
EAQ50413.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.602
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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