STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAHypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (239 aa)    
Predicted Functional Partners:
EAQ49174.1
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
 
 0.982
EAQ49173.1
COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.981
polA
Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
  
 0.738
EAQ48330.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ49774.1
Cytochrome c biogenesis (thioredoxin); COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ50252.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ50512.1
Thioredoxin, putative; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ49203.1
50S ribosomal protein L34; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ47814.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.515
EAQ48364.1
AhpC/TSA family protein; COG0457 FOG: TPR repeat.
    
  0.515
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.