STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49798.1COG4206 Outer membrane cobalamin receptor protein. (831 aa)    
Predicted Functional Partners:
EAQ49799.1
Hypothetical protein.
 
     0.937
EAQ51283.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.708
EAQ49272.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.551
EAQ48406.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.545
EAQ47783.1
Putative outer membrane protein.
  
 
   0.538
EAQ48861.1
Hypothetical protein.
 
     0.488
EAQ48862.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
 
    0.448
EAQ50277.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.447
EAQ50347.1
Hypothetical protein.
  
 
   0.432
EAQ49797.1
Endo-1,4-beta-xylanase D precursor; COG3507 Beta-xylosidase.
       0.427
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.