STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49816.1Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (221 aa)    
Predicted Functional Partners:
EAQ50314.1
COG0642 Signal transduction histidine kinase.
   
 0.973
EAQ49815.1
Putative transmembrane protein; COG0457 FOG: TPR repeat.
 
   0.972
EAQ49817.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver.
   
 0.818
EAQ49102.1
COG2202 FOG: PAS/PAC domain.
   
 0.818
EAQ49132.1
COG2202 FOG: PAS/PAC domain.
   
 0.818
EAQ48301.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 0.804
EAQ48744.1
Histidine kinase response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
   
 0.804
EAQ48979.1
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
    
  0.715
EAQ49813.1
Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
    
  0.699
EAQ49425.1
Histidine kinase response regulator hybrid protein; COG2203 FOG: GAF domain.
  
 0.658
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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