STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49829.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
EAQ50733.1
Hypothetical protein.
  
     0.634
EAQ51150.1
COG2010 Cytochrome c, mono- and diheme variants.
   
 
 0.562
EAQ49029.1
COG3569 Topoisomerase IB.
 
    0.531
EAQ49748.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.522
EAQ50735.1
Putative auxin-regulated protein.
  
     0.473
EAQ49828.1
Hypothetical protein.
 
    
0.472
EAQ49830.1
Hypothetical protein.
       0.442
EAQ50920.1
Hypothetical protein.
  
     0.430
EAQ49534.1
Putative mechanosensitive channel protein (MscS family protein); COG0668 Small-conductance mechanosensitive channel.
  
     0.425
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.