STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49966.1Multidrug-efflux transporter; COG0477 Permeases of the major facilitator superfamily. (405 aa)    
Predicted Functional Partners:
EAQ49970.1
Hypothetical protein; COG0462 Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.925
EAQ49971.1
COG0213 Thymidine phosphorylase.
 
     0.905
EAQ49975.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.886
EAQ49968.1
Phosphoribosylpyrophosphate synthetase.
 
     0.863
EAQ49967.1
Copper-transporting ATPase, P-type (copB); COG2217 Cation transport ATPase.
 
     0.862
EAQ49983.1
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
 
     0.841
EAQ49980.1
Carboxylesterase (est-1); COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.821
EAQ49986.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.772
EAQ49969.1
Hypothetical protein.
       0.742
EAQ49974.1
Hypothetical protein; COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
     0.709
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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