STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49967.1Copper-transporting ATPase, P-type (copB); COG2217 Cation transport ATPase. (700 aa)    
Predicted Functional Partners:
EAQ49966.1
Multidrug-efflux transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.862
EAQ49971.1
COG0213 Thymidine phosphorylase.
 
     0.780
EAQ49970.1
Hypothetical protein; COG0462 Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.771
EAQ49969.1
Hypothetical protein.
       0.740
EAQ49968.1
Phosphoribosylpyrophosphate synthetase.
  
    0.733
EAQ49972.1
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
       0.660
EAQ50021.1
Hypothetical protein; COG2217 Cation transport ATPase.
 
   0.657
EAQ49991.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
   0.650
EAQ49983.1
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
 
     0.628
EAQ49975.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.625
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.