STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50004.1Hypothetical protein; COG1858 Cytochrome c peroxidase. (150 aa)    
Predicted Functional Partners:
EAQ50003.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
 
     0.936
EAQ50005.1
Hypothetical protein.
 
     0.915
EAQ48095.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
 
 0.789
EAQ49215.1
Putative surface layer protein.
  
 
 0.789
EAQ50000.1
Hypothetical protein; COG2132 Putative multicopper oxidases.
 
     0.778
EAQ50002.1
Hypothetical protein.
       0.645
EAQ49840.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
   0.572
EAQ50310.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
   0.572
EAQ48012.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
   0.572
EAQ50001.1
Amino acid permease-associated region protein; COG0531 Amino acid transporters.
  
    0.521
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.