STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50016.1Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport. (800 aa)    
Predicted Functional Partners:
EAQ50017.1
Hypothetical protein.
 
     0.945
EAQ49320.1
Hypothetical protein.
 
     0.700
EAQ50015.1
Hypothetical protein.
       0.572
EAQ51132.1
TonB; COG2217 Cation transport ATPase.
  
   0.545
EAQ49260.1
Hypothetical protein.
  
     0.524
EAQ48918.1
Hypothetical protein; COG2317 Zn-dependent carboxypeptidase.
  
     0.524
infB-2
Translation initiation factor; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
   0.518
EAQ51057.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
   0.517
EAQ49839.1
Outer membrane assembly protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.515
EAQ50266.1
Putative phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
  
     0.504
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.