STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50018.1COG3544 Uncharacterized protein conserved in bacteria. (187 aa)    
Predicted Functional Partners:
EAQ50020.1
Putative copper transport-related membrane protein; COG2217 Cation transport ATPase.
  
    0.578
EAQ50019.1
Hypothetical protein.
       0.576
EAQ50021.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
    0.538
EAQ49247.1
Putative orphan protein; COG4325 Predicted membrane protein.
  
     0.531
EAQ50022.1
COG3228 Uncharacterized protein conserved in bacteria; Belongs to the MtfA family.
       0.509
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.