STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50043.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
EAQ50044.1
COG1649 Uncharacterized protein conserved in bacteria.
     0.989
EAQ50042.1
Hypothetical protein; COG2152 Predicted glycosylase.
 
     0.890
EAQ50041.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.874
EAQ48320.1
Hypothetical protein; COG4099 Predicted peptidase.
 
     0.766
EAQ50040.1
COG3537 Putative alpha-1,2-mannosidase.
 
     0.685
EAQ50039.1
Putative two-component system sensor protein, without kinase domain; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
     0.616
EAQ50046.1
Hypothetical protein; COG3537 Putative alpha-1,2-mannosidase.
 
     0.586
EAQ50045.1
beta-N-acetylhexosaminidase; COG3525 N-acetyl-beta-hexosaminidase.
 
     0.552
EAQ50038.1
COG3279 Response regulator of the LytR/AlgR family.
 
     0.511
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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