STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50093.1COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (490 aa)    
Predicted Functional Partners:
EAQ50094.1
Dolichol-phosphate mannosyltransferase, fused to C-terminal uncharacterized domain; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.948
EAQ50092.1
Hypothetical protein; COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H).
 
     0.904
EAQ50097.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.707
EAQ50096.1
Iron-sulfur cluster-binding protein; COG1138 Cytochrome c biogenesis factor.
 
     0.668
EAQ49484.1
COG0380 Trehalose-6-phosphate synthase.
  
 
 0.658
EAQ50098.1
Hypothetical protein.
 
    0.635
EAQ51158.1
COG0726 Predicted xylanase/chitin deacetylase.
  
 
 0.614
EAQ50488.1
Probable transmembrane protein; COG3000 Sterol desaturase.
 
  
  0.543
EAQ48853.1
Hypothetical protein; COG3000 Sterol desaturase.
 
  
  0.532
EAQ48822.1
TPR repeat protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.524
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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