Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ48032.1 | EAQ48033.1 | MED217_03410 | MED217_03415 | Competence protein; COG0658 Predicted membrane metal-binding protein. | NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.682 |
| EAQ48032.1 | EAQ48035.1 | MED217_03410 | MED217_03425 | Competence protein; COG0658 Predicted membrane metal-binding protein. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.685 |
| EAQ48032.1 | EAQ48842.1 | MED217_03410 | MED217_09847 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity. | 0.801 |
| EAQ48032.1 | EAQ49522.1 | MED217_03410 | MED217_11724 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Competence-damage inducible protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family. | 0.518 |
| EAQ48032.1 | EAQ50314.1 | MED217_03410 | MED217_04762 | Competence protein; COG0658 Predicted membrane metal-binding protein. | COG0642 Signal transduction histidine kinase. | 0.512 |
| EAQ48032.1 | EAQ50684.1 | MED217_03410 | MED217_14115 | Competence protein; COG0658 Predicted membrane metal-binding protein. | COG1555 DNA uptake protein and related DNA-binding proteins. | 0.610 |
| EAQ48032.1 | EAQ51343.1 | MED217_03410 | MED217_17410 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | 0.625 |
| EAQ48032.1 | EAQ51407.1 | MED217_03410 | MED217_17730 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Putative amidophosphoribosyl-transferase; COG1040 Predicted amidophosphoribosyltransferases. | 0.862 |
| EAQ48032.1 | EAQ51481.1 | MED217_03410 | MED217_18100 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Smf protein DNA processing chain A; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. | 0.887 |
| EAQ48032.1 | surE | MED217_03410 | MED217_03430 | Competence protein; COG0658 Predicted membrane metal-binding protein. | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.586 |
| EAQ48033.1 | EAQ48032.1 | MED217_03415 | MED217_03410 | NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Competence protein; COG0658 Predicted membrane metal-binding protein. | 0.682 |
| EAQ48033.1 | EAQ48035.1 | MED217_03415 | MED217_03425 | NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.812 |
| EAQ48033.1 | surE | MED217_03415 | MED217_03430 | NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.718 |
| EAQ48035.1 | EAQ48032.1 | MED217_03425 | MED217_03410 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Competence protein; COG0658 Predicted membrane metal-binding protein. | 0.685 |
| EAQ48035.1 | EAQ48033.1 | MED217_03425 | MED217_03415 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.812 |
| EAQ48035.1 | surE | MED217_03425 | MED217_03430 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.744 |
| EAQ48842.1 | EAQ48032.1 | MED217_09847 | MED217_03410 | Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity. | Competence protein; COG0658 Predicted membrane metal-binding protein. | 0.801 |
| EAQ48842.1 | EAQ50684.1 | MED217_09847 | MED217_14115 | Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity. | COG1555 DNA uptake protein and related DNA-binding proteins. | 0.440 |
| EAQ48842.1 | EAQ51343.1 | MED217_09847 | MED217_17410 | Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity. | Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | 0.774 |
| EAQ48842.1 | EAQ51407.1 | MED217_09847 | MED217_17730 | Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity. | Putative amidophosphoribosyl-transferase; COG1040 Predicted amidophosphoribosyltransferases. | 0.820 |
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