STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48042.1Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (168 aa)    
Predicted Functional Partners:
EAQ48043.1
Putative rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
    0.866
EAQ48041.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.854
EAQ48040.1
Rod shape-determining protein rodA; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
    0.845
EAQ48044.1
Putative rod-shape determining protein; COG1077 Actin-like ATPase involved in cell morphogenesis.
       0.801
EAQ50643.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.750
EAQ49471.1
Hypothetical protein.
  
     0.709
EAQ51136.1
Hypothetical protein.
  
     0.689
EAQ49700.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.679
EAQ50325.1
porT protein.
  
     0.678
EAQ47888.1
Hypothetical protein; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.675
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.