STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48043.1Putative rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (274 aa)    
Predicted Functional Partners:
EAQ48044.1
Putative rod-shape determining protein; COG1077 Actin-like ATPase involved in cell morphogenesis.
 
 
 0.995
EAQ48041.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.976
EAQ48040.1
Rod shape-determining protein rodA; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
  
 0.909
EAQ48042.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
    0.866
EAQ51019.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.778
EAQ48121.1
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
  
 0.773
EAQ47837.1
Hypothetical protein.
  
 
 0.673
EAQ48562.1
COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
 
 0.654
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).
       0.631
maf
Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.597
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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