STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48060.1Hypothetical protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. (388 aa)    
Predicted Functional Partners:
EAQ50647.1
COG1228 Imidazolonepropionase and related amidohydrolases; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
 
  0.901
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
  0.894
EAQ50258.1
COG0174 Glutamine synthetase.
     
 0.891
EAQ49383.1
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.891
EAQ48226.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.889
EAQ50335.1
Probable delta-1-pyrroline-5-carboxylate dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases.
   
 
  0.888
EAQ48910.1
COG0067 Glutamate synthase domain 1.
     
 0.885
EAQ50208.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.883
EAQ50331.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.881
EAQ48909.1
Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
 0.881
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.