STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48066.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase.
  
     0.698
EAQ51127.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
     0.630
EAQ50332.1
COG3239 Fatty acid desaturase.
  
     0.613
EAQ51126.1
Hypothetical protein.
 
     0.610
EAQ51144.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
     0.542
EAQ48067.1
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.524
EAQ49032.1
Hypothetical protein; COG0308 Aminopeptidase N.
  
     0.513
EAQ48072.1
Hypothetical protein.
 
     0.489
EAQ50838.1
Hypothetical protein.
  
     0.487
EAQ48351.1
Putative TPR-repeat protein; COG0457 FOG: TPR repeat.
  
    0.486
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.