STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50203.1Hypothetical protein; COG0662 Mannose-6-phosphate isomerase. (123 aa)    
Predicted Functional Partners:
EAQ50204.1
Hypothetical protein.
       0.784
EAQ50047.1
COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase.
     
 0.765
EAQ50205.1
Hypothetical protein; COG0433 Predicted ATPase.
       0.645
EAQ47952.1
COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.581
EAQ48002.1
Activator protein MtlR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 0.576
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.560
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
    
  0.552
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.541
EAQ51204.1
Hypothetical protein; COG2896 Molybdenum cofactor biosynthesis enzyme.
  
     0.532
EAQ50201.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.531
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.