STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50222.1prolyl-tRNA synthetase. (398 aa)    
Predicted Functional Partners:
EAQ50221.1
Putative hemin receptor; COG5651 PPE-repeat proteins.
 
     0.881
EAQ51478.1
Hypothetical protein.
  
     0.720
EAQ48996.1
Hypothetical protein.
  
     0.712
EAQ47823.1
Hypothetical protein.
  
     0.704
EAQ48920.1
Hypothetical protein.
  
     0.701
EAQ48318.1
Hypothetical protein.
  
     0.687
EAQ50838.1
Hypothetical protein.
  
     0.681
EAQ48183.1
Hypothetical protein.
  
     0.672
EAQ51167.1
Hypothetical protein; COG0833 Amino acid transporters.
  
     0.660
EAQ48776.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.