STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50230.1ATPase; COG1132 ABC-type multidrug transport system, ATPase and permease components. (589 aa)    
Predicted Functional Partners:
EAQ50353.1
HlyB/MsbA family ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
 
0.976
EAQ48545.1
ATPase; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  
 
0.907
EAQ49313.1
ABC transporter, ATP-binding protein, MsbA family protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  
 
0.902
EAQ50305.1
ABC transporter-related protein; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component.
 
    
0.896
truA-2
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
     0.825
EAQ48092.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
    
0.776
EAQ48822.1
TPR repeat protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 0.708
EAQ48585.1
COG0464 ATPases of the AAA+ class.
   
 0.675
EAQ50228.1
Hypothetical protein; COG0622 Predicted phosphoesterase.
       0.655
EAQ48093.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
   0.611
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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