STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50264.1COG1462 Uncharacterized protein involved in formation of curli polymers. (470 aa)    
Predicted Functional Partners:
EAQ50263.1
Curli production assembly/transport component, CsgF.
 
 
 0.998
EAQ50265.1
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
 
    0.944
EAQ50260.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
  
 0.880
EAQ50954.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
  
 0.808
EAQ50262.1
Hypothetical protein.
       0.800
EAQ50261.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
       0.626
EAQ50266.1
Putative phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
       0.537
EAQ50267.1
Hypothetical protein.
       0.466
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.