STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50274.1Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport. (1070 aa)    
Predicted Functional Partners:
EAQ50275.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
     0.946
EAQ50277.1
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.944
EAQ50273.1
Hypothetical protein.
 
     0.932
EAQ50276.1
Putative lipoprotein; COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
     0.919
EAQ50279.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
     0.911
EAQ49542.1
Hypothetical protein.
  
 
   0.830
EAQ49278.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.809
EAQ48866.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.776
EAQ47783.1
Putative outer membrane protein.
  
 
   0.767
EAQ48520.1
Hypothetical protein; COG3408 Glycogen debranching enzyme.
  
     0.755
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.