STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50290.1Tagaturonate reductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases. (479 aa)    
Predicted Functional Partners:
EAQ50291.1
COG2721 Altronate dehydratase.
 
 0.997
uxaC
COG1904 Glucuronate isomerase.
 
 
 0.996
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.904
EAQ50063.1
Putative carbohydrate kinase; COG0524 Sugar kinases, ribokinase family.
    
 0.898
EAQ50285.1
COG0524 Sugar kinases, ribokinase family.
 
  
 0.897
EAQ50065.1
Levanase; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.
     
 0.895
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.883
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.881
EAQ50286.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 0.873
kduI
Putative 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.827
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.