STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50309.1COG5651 PPE-repeat proteins. (307 aa)    
Predicted Functional Partners:
EAQ50310.1
OmpA family protein; COG0457 FOG: TPR repeat.
 
     0.937
EAQ50308.1
Hypothetical protein.
 
     0.779
EAQ49840.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
     0.770
EAQ48012.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
     0.769
EAQ51094.1
OmpA family protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.761
EAQ51501.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
   
 0.748
EAQ49259.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.742
EAQ51111.1
Hypothetical protein.
  
     0.735
EAQ51136.1
Hypothetical protein.
  
   
 0.712
EAQ48293.1
Hypothetical protein.
  
     0.705
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.