EAQ50327.1 protein (Leeuwenhoekiella blandensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ50327.1

Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component. (449 aa)

Predicted Functional Partners:

EAQ50328.1

0.977

EAQ50061.1

0.704

EAQ49522.1

0.586

ubiE

0.541

EAQ50325.1

0.540

EAQ48621.1

0.512

EAQ50324.1

0.483

EAQ50329.1

0.460

Your Current Organism:

Leeuwenhoekiella blandensis

NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ48621.1	EAQ50327.1	MED217_08740	MED217_04827	COG0314 Molybdopterin converting factor, large subunit.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.512
EAQ49522.1	EAQ50327.1	MED217_11724	MED217_04827	Competence-damage inducible protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.586
EAQ50061.1	EAQ50327.1	MED217_02885	MED217_04827	K+ uptake transporter, KtrB subunit; COG0168 Trk-type K+ transport systems, membrane components.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.704
EAQ50324.1	EAQ50325.1	MED217_04812	MED217_04817	Hypothetical protein; COG0500 SAM-dependent methyltransferases.	porT protein.	0.775
EAQ50324.1	EAQ50327.1	MED217_04812	MED217_04827	Hypothetical protein; COG0500 SAM-dependent methyltransferases.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.483
EAQ50324.1	ubiE	MED217_04812	MED217_04822	Hypothetical protein; COG0500 SAM-dependent methyltransferases.	Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.773
EAQ50325.1	EAQ50324.1	MED217_04817	MED217_04812	porT protein.	Hypothetical protein; COG0500 SAM-dependent methyltransferases.	0.775
EAQ50325.1	EAQ50327.1	MED217_04817	MED217_04827	porT protein.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.540
EAQ50325.1	EAQ50328.1	MED217_04817	MED217_04832	porT protein.	Putative potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.	0.458
EAQ50325.1	ubiE	MED217_04817	MED217_04822	porT protein.	Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.821
EAQ50327.1	EAQ48621.1	MED217_04827	MED217_08740	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	COG0314 Molybdopterin converting factor, large subunit.	0.512
EAQ50327.1	EAQ49522.1	MED217_04827	MED217_11724	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	Competence-damage inducible protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.	0.586
EAQ50327.1	EAQ50061.1	MED217_04827	MED217_02885	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	K+ uptake transporter, KtrB subunit; COG0168 Trk-type K+ transport systems, membrane components.	0.704
EAQ50327.1	EAQ50324.1	MED217_04827	MED217_04812	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	Hypothetical protein; COG0500 SAM-dependent methyltransferases.	0.483
EAQ50327.1	EAQ50325.1	MED217_04827	MED217_04817	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	porT protein.	0.540
EAQ50327.1	EAQ50328.1	MED217_04827	MED217_04832	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	Putative potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.	0.977
EAQ50327.1	EAQ50329.1	MED217_04827	MED217_04837	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	YpdA; COG0492 Thioredoxin reductase.	0.460
EAQ50327.1	ubiE	MED217_04827	MED217_04822	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.541
EAQ50328.1	EAQ50325.1	MED217_04832	MED217_04817	Putative potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.	porT protein.	0.458
EAQ50328.1	EAQ50327.1	MED217_04832	MED217_04827	Putative potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.	Putative potassium uptake protein; COG0569 K+ transport systems, NAD-binding component.	0.977