STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50441.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
EAQ50445.1
Hypothetical protein.
 
     0.883
EAQ50442.1
Hypothetical protein.
 
    
0.813
EAQ48099.1
Hypothetical protein; COG0209 Ribonucleotide reductase, alpha subunit.
 
     0.768
EAQ51472.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.727
EAQ50443.1
Hypothetical protein.
 
    
0.638
EAQ50444.1
Hypothetical protein.
 
    
0.630
EAQ50144.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.530
EAQ50143.1
ragA protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.504
EAQ50437.1
Hypothetical protein; COG0443 Molecular chaperone.
       0.440
EAQ50438.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
       0.440
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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