STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50446.1COG3507 Beta-xylosidase. (601 aa)    
Predicted Functional Partners:
EAQ49739.1
COG5368 Uncharacterized protein conserved in bacteria.
 
     0.729
EAQ49738.1
COG5368 Uncharacterized protein conserved in bacteria.
 
     0.722
EAQ49737.1
Hypothetical protein; COG4099 Predicted peptidase.
 
     0.609
EAQ49735.1
COG0657 Esterase/lipase.
 
     0.600
EAQ49500.1
Putative outer membrane protein probably involved in nutrient binding.
  
     0.473
EAQ50548.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.463
EAQ49734.1
N-acetylglucosamine-6-sulfatase precursor; COG3119 Arylsulfatase A and related enzymes.
 
     0.453
EAQ49877.1
COG3930 Uncharacterized protein conserved in bacteria.
  
     0.453
EAQ50447.1
COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
       0.447
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
   
 
  0.431
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.