STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50484.1COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. (161 aa)    
Predicted Functional Partners:
EAQ50483.1
Response regulator; COG0477 Permeases of the major facilitator superfamily.
 
    0.917
EAQ48910.1
COG0067 Glutamate synthase domain 1.
    
 0.905
EAQ49891.1
Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; COG2021 Homoserine acetyltransferase.
    
 0.887
EAQ49383.1
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.841
EAQ50208.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.840
EAQ50331.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.839
EAQ50937.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.839
gcvP
Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.774
panD
Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.749
EAQ49408.1
Putative aspartokinase I-homoserine dehydrogenase; COG0527 Aspartokinases.
    
 0.657
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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