STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50547.1Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1007 aa)    
Predicted Functional Partners:
EAQ50548.1
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.936
EAQ50550.1
Hypothetical protein; COG4409 Neuraminidase (sialidase).
 
     0.776
EAQ49500.1
Putative outer membrane protein probably involved in nutrient binding.
  
     0.761
EAQ50549.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.572
EAQ50142.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.507
EAQ51196.1
Hypothetical protein; COG5178 U5 snRNP spliceosome subunit.
  
 
   0.496
EAQ49057.1
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.469
EAQ48171.1
COG1538 Outer membrane protein.
  
    0.464
EAQ50130.1
Hypothetical protein.
  
     0.458
EAQ50072.1
Hypothetical protein.
  
 
   0.454
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.