STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50577.1COG0308 Aminopeptidase N. (689 aa)    
Predicted Functional Partners:
EAQ47863.1
COG0308 Aminopeptidase N.
  
  
 
0.903
glyA-2
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.891
EAQ50578.1
Cell volume regulation protein CvrA; COG4667 Predicted esterase of the alpha-beta hydrolase superfamily.
       0.799
EAQ49644.1
Aminopeptidase M1 family protein; COG0308 Aminopeptidase N.
  
  
  0.620
recG
ATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.570
EAQ49412.1
DTDP-4-dehydrorhamnose reductase, rfbD-like protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
     0.491
EAQ48915.1
Hypothetical protein.
  
     0.490
EAQ51167.1
Hypothetical protein; COG0833 Amino acid transporters.
  
     0.459
EAQ50574.1
Hypothetical protein.
 
     0.434
EAQ49396.1
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
     0.424
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.