STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50584.1Putative hydrolase; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase. (427 aa)    
Predicted Functional Partners:
EAQ48910.1
COG0067 Glutamate synthase domain 1.
    
  0.795
EAQ50585.1
Hypothetical protein; COG0191 Fructose/tagatose bisphosphate aldolase.
 
     0.772
EAQ50583.1
COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
    
  0.454
EAQ50582.1
Hypothetical protein; COG2200 FOG: EAL domain.
       0.441
EAQ50581.1
Hypothetical protein.
       0.409
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.