STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49068.1Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. (132 aa)    
Predicted Functional Partners:
EAQ49070.1
COG4334 Uncharacterized protein conserved in bacteria.
 
     0.710
EAQ49073.1
Hypothetical protein.
 
     0.691
EAQ49067.1
COG1064 Zn-dependent alcohol dehydrogenases.
       0.647
EAQ49069.1
Nodulation protein L; COG0110 Acetyltransferase (isoleucine patch superfamily).
       0.535
EAQ49071.1
COG1073 Hydrolases of the alpha/beta superfamily.
       0.518
EAQ49066.1
Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
    
0.448
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.