STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49209.1Hypothetical protein; COG0550 Topoisomerase IA. (122 aa)    
Predicted Functional Partners:
EAQ49210.1
DNA recombination protein RmuC; COG1322 Uncharacterized protein conserved in bacteria.
       0.753
EAQ49916.1
Hypothetical protein; COG0569 K+ transport systems, NAD-binding component.
  
     0.717
EAQ49221.1
Hypothetical protein.
  
     0.658
EAQ49208.1
COG1607 Acyl-CoA hydrolase.
       0.650
EAQ49211.1
iron(III) ABC transporter ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
       0.553
EAQ49213.1
Periplasmic-binding protein of ABC transporter; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.526
EAQ49212.1
Permease protein of iron(III) ABC transporter; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.520
EAQ51125.1
Hypothetical protein; COG0428 Predicted divalent heavy-metal cations transporter.
  
     0.449
EAQ49849.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
     0.422
EAQ51130.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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