STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49216.1Hypothetical protein; COG0793 Periplasmic protease. (507 aa)    
Predicted Functional Partners:
EAQ49220.1
Hypothetical protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.
 
     0.724
EAQ49219.1
Hypothetical protein.
 
 
   0.701
EAQ48822.1
TPR repeat protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 0.687
EAQ49217.1
COG0793 Periplasmic protease.
 
    
0.661
EAQ49221.1
Hypothetical protein.
 
     0.620
EAQ48475.1
Putative outer membrane protein.
  
   0.525
EAQ49218.1
Putative extracytoplasmic function alternative sigma factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.508
EAQ49128.1
Hep_Hag family protein; COG5295 Autotransporter adhesin.
  
   0.502
EAQ50345.1
Hypothetical protein.
  
     0.489
EAQ49232.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.486
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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