STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49261.1Putative hemagglutinin/hemolysin-related protein. (1551 aa)    
Predicted Functional Partners:
EAQ49260.1
Hypothetical protein.
 
     0.933
EAQ49259.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
 
   0.901
EAQ51399.1
COG5651 PPE-repeat proteins.
  
     0.774
EAQ47878.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.765
EAQ50836.1
Hypothetical protein.
  
 
   0.754
EAQ50667.1
VCBS; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.749
EAQ50415.1
Hypothetical protein.
  
     0.744
EAQ49360.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
  
     0.741
EAQ50310.1
OmpA family protein; COG0457 FOG: TPR repeat.
  
  0.732
EAQ49601.1
N-acetylmuramoyl-L-alanine amidase; COG4991 Uncharacterized protein with a bacterial SH3 domain homologue.
  
  
  0.718
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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