Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ47900.1 | EAQ48177.1 | MED217_18681 | MED217_00225 | Hypothetical protein. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | 0.535 |
EAQ47900.1 | EAQ49310.1 | MED217_18681 | MED217_07891 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EAQ48177.1 | EAQ47900.1 | MED217_00225 | MED217_18681 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | Hypothetical protein. | 0.535 |
EAQ48177.1 | EAQ48788.1 | MED217_00225 | MED217_09577 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | TPR domain protein; COG0457 FOG: TPR repeat. | 0.420 |
EAQ48177.1 | EAQ49310.1 | MED217_00225 | MED217_07891 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | Hypothetical protein. | 0.490 |
EAQ48788.1 | EAQ48177.1 | MED217_09577 | MED217_00225 | TPR domain protein; COG0457 FOG: TPR repeat. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | 0.420 |
EAQ48788.1 | EAQ49310.1 | MED217_09577 | MED217_07891 | TPR domain protein; COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.421 |
EAQ48904.1 | EAQ49310.1 | MED217_10157 | MED217_07891 | GldG; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component. | Hypothetical protein. | 0.433 |
EAQ49102.1 | EAQ49132.1 | MED217_06851 | MED217_07001 | COG2202 FOG: PAS/PAC domain. | COG2202 FOG: PAS/PAC domain. | 0.999 |
EAQ49102.1 | EAQ49310.1 | MED217_06851 | MED217_07891 | COG2202 FOG: PAS/PAC domain. | Hypothetical protein. | 0.589 |
EAQ49102.1 | EAQ49817.1 | MED217_06851 | MED217_01665 | COG2202 FOG: PAS/PAC domain. | Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ49102.1 | EAQ50314.1 | MED217_06851 | MED217_04762 | COG2202 FOG: PAS/PAC domain. | COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ49132.1 | EAQ49102.1 | MED217_07001 | MED217_06851 | COG2202 FOG: PAS/PAC domain. | COG2202 FOG: PAS/PAC domain. | 0.999 |
EAQ49132.1 | EAQ49310.1 | MED217_07001 | MED217_07891 | COG2202 FOG: PAS/PAC domain. | Hypothetical protein. | 0.589 |
EAQ49132.1 | EAQ49817.1 | MED217_07001 | MED217_01665 | COG2202 FOG: PAS/PAC domain. | Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ49132.1 | EAQ50314.1 | MED217_07001 | MED217_04762 | COG2202 FOG: PAS/PAC domain. | COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ49310.1 | EAQ47900.1 | MED217_07891 | MED217_18681 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EAQ49310.1 | EAQ48177.1 | MED217_07891 | MED217_00225 | Hypothetical protein. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. | 0.490 |
EAQ49310.1 | EAQ48788.1 | MED217_07891 | MED217_09577 | Hypothetical protein. | TPR domain protein; COG0457 FOG: TPR repeat. | 0.421 |
EAQ49310.1 | EAQ48904.1 | MED217_07891 | MED217_10157 | Hypothetical protein. | GldG; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component. | 0.433 |
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