STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49310.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
EAQ50314.1
COG0642 Signal transduction histidine kinase.
    
 0.831
EAQ49311.1
Hypothetical protein.
  
    0.808
EAQ49312.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.719
EAQ49817.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver.
     
 0.589
EAQ49102.1
COG2202 FOG: PAS/PAC domain.
     
 0.589
EAQ49132.1
COG2202 FOG: PAS/PAC domain.
     
 0.589
EAQ47900.1
Hypothetical protein.
  
     0.562
EAQ48177.1
Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
     0.490
EAQ48904.1
GldG; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.
  
     0.433
EAQ48788.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.421
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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