STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49350.1COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase. (90 aa)    
Predicted Functional Partners:
EAQ47787.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
     0.980
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.958
EAQ49891.1
Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; COG2021 Homoserine acetyltransferase.
  
 
 0.935
asd
Aspartate-semialdehyde dehydrogenase, USG-1 related; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.893
EAQ49926.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
  
  
  0.849
EAQ49349.1
Hypothetical protein.
       0.798
EAQ49408.1
Putative aspartokinase I-homoserine dehydrogenase; COG0527 Aspartokinases.
  
 
 0.775
EAQ50404.1
FAD linked oxidase-like; COG0277 FAD/FMN-containing dehydrogenases.
   
 
  0.659
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
  
 0.641
EAQ49348.1
Hypothetical protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
       0.604
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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