STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47788.1Lipoprotein protein, putative; COG4105 DNA uptake lipoprotein. (268 aa)    
Predicted Functional Partners:
EAQ47789.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 
 0.973
EAQ51107.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
 
 0.953
EAQ47791.1
Hypothetical protein.
 
     0.900
EAQ50118.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
   
 
 0.846
EAQ50322.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
 
 0.846
EAQ51211.1
Hypothetical protein.
   
 
 0.846
EAQ47790.1
Flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
 
     0.812
EAQ50149.1
30S ribosomal protein S12; COG4775 Outer membrane protein/protective antigen OMA87.
  
 
 0.810
EAQ48772.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
 
 0.810
EAQ49538.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
 
 0.810
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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