STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48542.1Hypothetical protein; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (349 aa)    
Predicted Functional Partners:
EAQ48522.1
COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.909
EAQ49496.1
Endo-1,4-beta-xylanase D precursor; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 43 family.
 
     0.847
EAQ49797.1
Endo-1,4-beta-xylanase D precursor; COG3507 Beta-xylosidase.
 
     0.830
EAQ49274.1
COG3507 Beta-xylosidase.
 
   
 0.786
EAQ48478.1
Putative xylosidase/arabinosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.728
EAQ49495.1
Hypothetical protein; COG3507 Beta-xylosidase.
 
     0.721
EAQ49494.1
COG3533 Uncharacterized protein conserved in bacteria.
 
     0.633
EAQ49498.1
alpha-L-arabinosidase; COG3534 Alpha-L-arabinofuranosidase.
 
     0.630
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.628
EAQ49497.1
Putative endo-arabinase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.576
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.