STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48568.1Putative flagellar motor protein MotB; COG1196 Chromosome segregation ATPases. (279 aa)    
Predicted Functional Partners:
EAQ49151.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.925
EAQ51413.1
Putative flagellar motor protein MotB; COG1196 Chromosome segregation ATPases.
  
  
 
0.765
EAQ48143.1
Thrombospondin type 3 repeat:OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
  0.711
EAQ50391.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
   
   0.629
EAQ50607.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
  0.610
EAQ50314.1
COG0642 Signal transduction histidine kinase.
  
  
 0.598
EAQ48082.1
COG1843 Flagellar hook capping protein.
  
  
 0.574
EAQ48548.1
COG1862 Preprotein translocase subunit YajC.
  
 
 
 0.531
EAQ48566.1
Hypothetical protein.
       0.492
EAQ48567.1
Hypothetical protein.
       0.492
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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