STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48572.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.821
EAQ48574.1
SpoOJ regulator protein; COG1192 ATPases involved in chromosome partitioning.
       0.821
EAQ48573.1
Putative ParB-like chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
       0.789
EAQ48570.1
Signal peptidase I; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Belongs to the peptidase S26 family.
 
     0.788
EAQ47789.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
  
     0.697
EAQ50322.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.686
EAQ50811.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.686
EAQ50389.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
    0.678
EAQ47987.1
Hypothetical protein.
  
     0.670
EAQ48019.1
Putative outer membrane protein.
  
     0.660
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.