STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48600.1Hypothetical protein; COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit. (145 aa)    
Predicted Functional Partners:
EAQ48596.1
COG3500 Phage protein D.
 
 
   0.999
EAQ48593.1
Hypothetical protein.
 
 
 
 0.990
EAQ48592.1
Hypothetical protein.
 
 
 
 0.989
EAQ48594.1
COG3628 Phage baseplate assembly protein W.
 
   0.989
EAQ48597.1
COG1652 Uncharacterized protein containing LysM domain.
 
   0.989
EAQ48601.1
COG3497 Phage tail sheath protein FI.
 
 
 0.984
EAQ48603.1
Hypothetical protein.
 
 
 
 0.984
EAQ48598.1
Hypothetical protein.
   
   0.956
EAQ48591.1
Hypothetical protein.
 
 
   0.951
EAQ48587.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
 
   0.947
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.