STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48633.1exo-poly-alpha-D-galacturonosidase precursor; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family. (547 aa)    
Predicted Functional Partners:
EAQ50295.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
 
  0.983
EAQ48635.1
Putative pectinesterase precursor; COG4677 Pectin methylesterase.
  
  0.966
EAQ48630.1
Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
     0.955
EAQ48632.1
Putative pectinesterase precursor; COG0657 Esterase/lipase.
  
  0.951
EAQ48631.1
Xylosidase/arabinosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    0.940
EAQ48636.1
Putative pectate lyase.
 
  0.869
EAQ48509.1
Putative rhamnogalacturonan acetylesterase; COG2755 Lysophospholipase L1 and related esterases.
 
  0.859
EAQ50280.1
Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
     0.807
EAQ48629.1
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.795
EAQ49792.1
Putative pectinesterase precursor; COG4677 Pectin methylesterase.
 
  
  0.793
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.