STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48641.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
EAQ50345.1
Hypothetical protein.
  
     0.730
EAQ48020.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.729
EAQ49232.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.721
EAQ49200.1
Hypothetical protein.
  
     0.713
EAQ50384.1
Hypothetical protein.
  
     0.699
EAQ48987.1
Hypothetical protein.
  
     0.694
EAQ49011.1
Hypothetical protein.
  
     0.688
EAQ49436.1
Hypothetical protein; COG1201 Lhr-like helicases.
  
     0.668
EAQ51170.1
Hypothetical protein.
  
     0.668
EAQ48007.1
Hypothetical protein.
  
     0.653
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.