STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48683.1Oxidoreductase, GMC family protein; COG2303 Choline dehydrogenase and related flavoproteins. (569 aa)    
Predicted Functional Partners:
EAQ48682.1
Hypothetical protein.
 
 0.963
EAQ48447.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
    
  0.868
EAQ48212.1
Hypothetical protein.
 
 0.828
EAQ48251.1
Hypothetical protein.
   
 
 0.762
EAQ48205.1
Putative multi-domain protein.
 
     0.732
EAQ48443.1
Periplasmic protease; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
    
 0.677
EAQ48207.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
     0.667
EAQ48862.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
    
 0.650
EAQ49360.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
    
 0.650
EAQ51220.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
 0.650
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.