STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48724.1Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (332 aa)    
Predicted Functional Partners:
EAQ48723.1
COG2307 Uncharacterized protein conserved in bacteria.
 
    0.916
EAQ48722.1
Hypothetical protein.
 
    0.897
EAQ50614.1
Hypothetical protein.
 
  
 0.852
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.618
EAQ48726.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.618
EAQ48727.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.444
EAQ51221.1
COG0753 Catalase.
   
   0.401
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.