STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48737.1Hypothetical protein; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases. (174 aa)    
Predicted Functional Partners:
EAQ48738.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
       0.773
EAQ48739.1
COG1522 Transcriptional regulators.
       0.606
EAQ51401.1
Hypothetical protein; Belongs to the UPF0403 family.
  
     0.589
EAQ48734.1
COG0221 Inorganic pyrophosphatase.
       0.558
EAQ48735.1
Putative beta-xylosidase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.558
EAQ48736.1
Hypothetical protein.
       0.558
asnB
Asparagine synthetase B.
  
     0.551
EAQ48740.1
Hypothetical protein; COG2866 Predicted carboxypeptidase.
 
     0.517
EAQ49662.1
Hypothetical Cytosolic Protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.505
EAQ51356.1
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
  
     0.419
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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