STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48835.1Hypothetical protein; COG1984 Allophanate hydrolase subunit 2. (291 aa)    
Predicted Functional Partners:
EAQ48836.1
COG2049 Allophanate hydrolase subunit 1.
 0.999
EAQ48837.1
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
EAQ49517.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
   
 0.954
EAQ47892.1
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.947
EAQ48838.1
Mn2+/Fe2+ transporter, NRAMP family protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
 
    0.905
EAQ48910.1
COG0067 Glutamate synthase domain 1.
   
 
  0.893
EAQ50335.1
Probable delta-1-pyrroline-5-carboxylate dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases.
   
 
 0.889
EAQ50258.1
COG0174 Glutamine synthetase.
   
 
 0.881
EAQ48839.1
Hypothetical protein.
       0.542
EAQ47891.1
Oxaloacetate decarboxylase, alpha subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.480
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.